Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim33Q99PP7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim33Q99PP7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim33Q99PP7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trim33Q99PP7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Gm38341-201ENSMUST00000195357 515 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Gm43758-201ENSMUST00000199500 367 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.08□□□□□ -0.48
Trim33Q99PP7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim33Q99PP7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.07□□□□□ -0.48
Trim33Q99PP7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm44958-201ENSMUST00000203734 736 ntBASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim33Q99PP7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim33Q99PP7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms