Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm7357-201ENSMUST00000195361 2991 ntBASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Mir686-201ENSMUST00000102174 109 ntBASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2a1Q99PM3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 AC165080.1-201ENSMUST00000215257 3123 ntBASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm7222-201ENSMUST00000117512 906 ntBASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.15□□□□□ -0.3
Gtf2a1Q99PM3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Gtf2a1Q99PM3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.31
Gtf2a1Q99PM3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gtf2a1Q99PM3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms