Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkd1Q99MH6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.38□□□□□ -0.59
Nkd1Q99MH6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nkd1Q99MH6 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkd1Q99MH6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nkd1Q99MH6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Gm37201-201ENSMUST00000191845 523 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkd1Q99MH6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Gm14999-201ENSMUST00000121039 624 ntBASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Gm11424-201ENSMUST00000121929 829 ntBASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkd1Q99MH6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.35□□□□□ -0.59
Nkd1Q99MH6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkd1Q99MH6 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms