Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm42693-201ENSMUST00000196779 631 ntBASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm14660-201ENSMUST00000119809 575 ntBASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdk5rap3Q99LM2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm45784-201ENSMUST00000188360 142 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk5rap3Q99LM2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms