Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm9135-201ENSMUST00000182963 990 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm18463-201ENSMUST00000207258 474 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm17931-201ENSMUST00000208132 634 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm6722-201ENSMUST00000221586 390 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.85□□□□□ -0.03
RtcbQ99LF4 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.85□□□□□ -0.03
RtcbQ99LF4 Gm25545-201ENSMUST00000122673 323 ntBASIC14.85□□□□□ -0.03
RtcbQ99LF4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Gm6450-201ENSMUST00000200896 574 ntBASIC14.85□□□□□ -0.03
RtcbQ99LF4 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.85□□□□□ -0.03
RtcbQ99LF4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RtcbQ99LF4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm9089-201ENSMUST00000122027 526 ntBASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Mir6923-201ENSMUST00000184592 72 ntBASIC14.84□□□□□ -0.03
RtcbQ99LF4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.84□□□□□ -0.03
RtcbQ99LF4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Gm4604-201ENSMUST00000025040 390 ntBASIC14.84□□□□□ -0.03
RtcbQ99LF4 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms