Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm13612-201ENSMUST00000119276 390 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm2231-201ENSMUST00000125661 612 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Rmrp-201ENSMUST00000157463 271 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.17□□□□□ -0.46
Cdk9Q99J95 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk9Q99J95 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm14127-201ENSMUST00000117906 678 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Proscos-202ENSMUST00000178990 666 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.16□□□□□ -0.46
Cdk9Q99J95 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk9Q99J95 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm4984-201ENSMUST00000115987 360 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm15824-201ENSMUST00000119516 955 ntBASIC12.15□□□□□ -0.46
Cdk9Q99J95 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk9Q99J95 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms