Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm9230-201ENSMUST00000188228 532 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Rprl1-202ENSMUST00000198476 238 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm19187-201ENSMUST00000206781 892 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Gm9996-201ENSMUST00000070359 913 ntBASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdha3Q91Y16 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm14130-201ENSMUST00000118417 987 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm44967-201ENSMUST00000207047 631 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdha3Q91Y16 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdha3Q91Y16 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdha3Q91Y16 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdha3Q91Y16 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdha3Q91Y16 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.65□□□□□ -0.39
Pcdha3Q91Y16 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm15808-201ENSMUST00000119046 604 ntBASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdha3Q91Y16 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms