Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Mir6979-201ENSMUST00000183927 56 ntBASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Gm3786-201ENSMUST00000202659 378 ntBASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Nsd1-205ENSMUST00000224693 852 ntBASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx41Q91VN6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm23200-201ENSMUST00000104379 132 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm11434-201ENSMUST00000122379 629 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm24749-201ENSMUST00000157838 343 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm9022-201ENSMUST00000182482 992 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm45598-202ENSMUST00000210719 986 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ddx41Q91VN6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ddx41Q91VN6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.89□□□□□ -0.19
Ddx41Q91VN6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms