Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm18304-201ENSMUST00000189162 546 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.98□□□□□ -0.49
Vsx1Q91V10 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vsx1Q91V10 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm12857-201ENSMUST00000117678 592 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm20392-201ENSMUST00000173047 701 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Mir8115-201ENSMUST00000184992 119 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm42518-201ENSMUST00000196277 938 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm43520-201ENSMUST00000197996 164 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm2965-201ENSMUST00000198365 343 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.97□□□□□ -0.49
Vsx1Q91V10 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Vsx1Q91V10 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm12516-201ENSMUST00000120819 385 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms