Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Slf1Q8R3P9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.2□□□□□ -0.46
Slf1Q8R3P9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slf1Q8R3P9 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slf1Q8R3P9 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms