Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm11949-201ENSMUST00000117640 372 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Mir7076-201ENSMUST00000183519 74 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm43058-201ENSMUST00000197645 625 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp7Q8R1T1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm11628-201ENSMUST00000117568 171 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm22138-201ENSMUST00000158748 128 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm6485-201ENSMUST00000160676 439 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm9358-201ENSMUST00000183067 927 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Mir8115-201ENSMUST00000184992 119 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm6867-201ENSMUST00000219165 425 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp7Q8R1T1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms