Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm19046-201ENSMUST00000221263 1298 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 AC122346.3-201ENSMUST00000223983 306 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm38344-201ENSMUST00000195306 1353 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx54Q8K4L0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm25053-201ENSMUST00000103982 133 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm25922-201ENSMUST00000104281 130 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm11996-201ENSMUST00000117538 915 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm24679-201ENSMUST00000158762 111 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm25053-202ENSMUST00000199731 132 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Gm17213-201ENSMUST00000165161 1360 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx54Q8K4L0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm11957-201ENSMUST00000118304 779 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm12274-201ENSMUST00000120062 385 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm43671-201ENSMUST00000200422 433 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx54Q8K4L0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.71■□□□□ 0.1
Ddx54Q8K4L0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms