Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.4□□□□□ -0.58
Clrn1Q8K445 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn1Q8K445 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.4□□□□□ -0.59
Clrn1Q8K445 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Clrn1Q8K445 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn1Q8K445 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn1Q8K445 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Clrn1Q8K445 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn1Q8K445 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm12015-201ENSMUST00000117065 843 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm11989-201ENSMUST00000117240 672 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm11362-201ENSMUST00000118838 850 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm13350-201ENSMUST00000120519 479 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm6963-201ENSMUST00000147879 379 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.39□□□□□ -0.59
Clrn1Q8K445 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Clrn1Q8K445 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Map1b-203ENSMUST00000223725 2669 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm14644-201ENSMUST00000116671 647 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm7584-201ENSMUST00000175829 940 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms