Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lin28aQ8K3Y3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Mir5120-201ENSMUST00000175020 78 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm4034-201ENSMUST00000187674 480 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 AY036118-201ENSMUST00000200021 923 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm43962-201ENSMUST00000203898 190 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm19208-201ENSMUST00000213861 912 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm5455-201ENSMUST00000058710 715 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lin28aQ8K3Y3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Pck2-205ENSMUST00000226352 2784 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm23912-201ENSMUST00000104687 87 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm12164-201ENSMUST00000121695 551 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm18730-201ENSMUST00000218038 343 ntBASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Lin28aQ8K3Y3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms