Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm14832-201ENSMUST00000121289 322 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm25043-201ENSMUST00000158604 212 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm2546-201ENSMUST00000182630 991 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm6266-201ENSMUST00000203844 806 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm19994-201ENSMUST00000217086 586 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm14660-201ENSMUST00000119809 575 ntBASIC10.75□□□□□ -0.69
ShfQ8CG80 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm24845-201ENSMUST00000158034 109 ntBASIC10.75□□□□□ -0.69
ShfQ8CG80 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm45784-201ENSMUST00000188360 142 ntBASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.75□□□□□ -0.69
ShfQ8CG80 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ShfQ8CG80 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ShfQ8CG80 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.74□□□□□ -0.69
ShfQ8CG80 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms