Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf31Q8CCF0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Prpf31Q8CCF0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Gm15515-201ENSMUST00000117827 822 ntBASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Gm7848-201ENSMUST00000210739 718 ntBASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Prpf31Q8CCF0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm23596-201ENSMUST00000104304 132 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm5419-201ENSMUST00000119301 527 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm11450-201ENSMUST00000121144 333 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm43184-201ENSMUST00000197247 542 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Gm26448-201ENSMUST00000082446 203 ntBASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Prpf31Q8CCF0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Prpf31Q8CCF0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Pck2-205ENSMUST00000226352 2784 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm8343-201ENSMUST00000182705 994 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm18893-201ENSMUST00000198416 943 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Gm4157-201ENSMUST00000211647 679 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Prpf31Q8CCF0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms