Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc60Q8C4J0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Gm14208-201ENSMUST00000119645 678 ntBASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Gm2383-201ENSMUST00000181461 807 ntBASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Gm9136-201ENSMUST00000193368 454 ntBASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc60Q8C4J0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm12036-201ENSMUST00000120008 530 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm27627-201ENSMUST00000183644 150 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm29615-201ENSMUST00000185371 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28224-201ENSMUST00000186078 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm29001-201ENSMUST00000186177 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28292-201ENSMUST00000186593 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28101-201ENSMUST00000187608 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm29076-201ENSMUST00000187689 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28302-201ENSMUST00000187931 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28646-201ENSMUST00000188220 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28205-201ENSMUST00000189177 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm29032-201ENSMUST00000189797 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm28695-201ENSMUST00000190300 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm37448-201ENSMUST00000192795 697 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 AY036118-201ENSMUST00000200021 923 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm18056-201ENSMUST00000207670 568 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm18061-201ENSMUST00000208350 562 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm18063-201ENSMUST00000208529 568 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm18052-201ENSMUST00000208750 559 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc60Q8C4J0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ccdc60Q8C4J0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms