Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Gm17827-201ENSMUST00000211825 742 ntBASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp44Q8C2S0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm27627-201ENSMUST00000183644 150 ntBASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm270-201ENSMUST00000223010 976 ntBASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp44Q8C2S0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp44Q8C2S0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp44Q8C2S0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Usp44Q8C2S0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp44Q8C2S0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm15711-201ENSMUST00000118889 535 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.08□□□□□ -0.16
Usp44Q8C2S0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms