Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.45□□□□□ -0.42
Trub1Q8C0D0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trub1Q8C0D0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Gm44364-201ENSMUST00000198368 141 ntBASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Gm43822-201ENSMUST00000200285 476 ntBASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Gm45598-202ENSMUST00000210719 986 ntBASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trub1Q8C0D0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm3961-201ENSMUST00000204425 994 ntBASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.43□□□□□ -0.42
Trub1Q8C0D0 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms