Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm13297-201ENSMUST00000120205 934 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm37489-201ENSMUST00000191883 159 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm44405-201ENSMUST00000198952 126 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm43822-201ENSMUST00000200285 476 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.35
Trerf1Q8BXJ2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trerf1Q8BXJ2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Trerf1Q8BXJ2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trerf1Q8BXJ2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm15370-201ENSMUST00000117158 253 ntBASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm4986-201ENSMUST00000119731 549 ntBASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.83□□□□□ -0.36
Trerf1Q8BXJ2 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trerf1Q8BXJ2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms