Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm26956-201ENSMUST00000182176 986 ntBASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4Q8BQZ5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Gm20482-202ENSMUST00000174729 825 ntBASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Gm37201-201ENSMUST00000191845 523 ntBASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Gm6082-201ENSMUST00000215204 454 ntBASIC11.71□□□□□ -0.53
Cpsf4Q8BQZ5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4Q8BQZ5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms