Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clrn3Q8BHH8 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm10608-202ENSMUST00000213924 676 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm39404-201ENSMUST00000216350 313 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm9823-201ENSMUST00000051212 327 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm9899-201ENSMUST00000065519 555 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Clrn3Q8BHH8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Clrn3Q8BHH8 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm13875-201ENSMUST00000120162 282 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm25043-201ENSMUST00000158604 212 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm27501-201ENSMUST00000183599 107 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm43630-201ENSMUST00000201550 776 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm9368-201ENSMUST00000219348 831 ntBASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Clrn3Q8BHH8 Gm8227-201ENSMUST00000223306 571 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms