Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm2231-201ENSMUST00000125661 612 ntBASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Mir8102-201ENSMUST00000184148 139 ntBASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm8598-201ENSMUST00000221184 836 ntBASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Slc5a7Q8BGY9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Slc5a7Q8BGY9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm12928-201ENSMUST00000117115 573 ntBASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm13315-201ENSMUST00000120376 991 ntBASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Proscos-202ENSMUST00000178990 666 ntBASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm2495-201ENSMUST00000191160 466 ntBASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms