Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm11439-201ENSMUST00000118598 409 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm12997-201ENSMUST00000120207 640 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm29199-201ENSMUST00000187766 775 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Atg4dQ8BGV9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm11509-201ENSMUST00000117358 325 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm24990-201ENSMUST00000157406 323 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm9192-201ENSMUST00000183221 985 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Atg4dQ8BGV9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atg4dQ8BGV9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms