Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ubp1Q811S7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm4034-201ENSMUST00000187674 480 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.97□□□□□ -0.49
Ubp1Q811S7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ubp1Q811S7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.96□□□□□ -0.49
Ubp1Q811S7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ubp1Q811S7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ubp1Q811S7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ubp1Q811S7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms