Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.86□□□□□ -0.51
Ccdc116Q80X53 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc116Q80X53 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm27501-201ENSMUST00000183599 107 ntBASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc116Q80X53 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm12036-201ENSMUST00000120008 530 ntBASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm5706-201ENSMUST00000181525 993 ntBASIC11.84□□□□□ -0.51
Ccdc116Q80X53 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm37489-201ENSMUST00000191883 159 ntBASIC11.84□□□□□ -0.51
Ccdc116Q80X53 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Gm6013-201ENSMUST00000212264 699 ntBASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc116Q80X53 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms