Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm7722-201ENSMUST00000120646 741 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm14665-201ENSMUST00000122294 557 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm23085-201ENSMUST00000157849 293 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 Rprl1-201ENSMUST00000158050 327 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm6905-201ENSMUST00000205729 511 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm26035-201ENSMUST00000083065 308 ntBASIC11.57□□□□□ -0.56
Vrk1Q80X41 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vrk1Q80X41 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm8343-201ENSMUST00000182705 994 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm44545-201ENSMUST00000208262 746 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm10179-201ENSMUST00000086233 688 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.56□□□□□ -0.56
Vrk1Q80X41 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vrk1Q80X41 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Vrk1Q80X41 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms