Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rpp38Q80UU2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Cog3-203ENSMUST00000227473 4197 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm5616-201ENSMUST00000165252 384 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm8741-201ENSMUST00000174736 384 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpp38Q80UU2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm22133-201ENSMUST00000102082 109 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm6114-201ENSMUST00000182472 968 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Gm9192-201ENSMUST00000183221 985 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.04□□□□□ -0.48
Rpp38Q80UU2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms