Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.24□□□□□ -0.77
Rif1Q6PR54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rif1Q6PR54 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm25076-201ENSMUST00000104098 132 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Mir598-201ENSMUST00000102094 79 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm23612-201ENSMUST00000103823 110 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm5071-201ENSMUST00000104922 1035 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm11996-201ENSMUST00000117538 915 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm23576-201ENSMUST00000179918 110 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Rif1Q6PR54 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm6612-201ENSMUST00000170777 395 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 AU015228-201ENSMUST00000121103 1320 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Rif1Q6PR54 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.22□□□□□ -0.77
Rif1Q6PR54 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms