Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm11675-201ENSMUST00000121873 832 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm42657-201ENSMUST00000201746 211 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm43852-201ENSMUST00000202098 917 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Gm18986-201ENSMUST00000216029 1986 ntBASIC14□□□□□ -0.17
Nup98Q6PFD9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Gm42816-201ENSMUST00000198433 325 ntBASIC14□□□□□ -0.17
Nup98Q6PFD9 Gm18561-201ENSMUST00000206027 804 ntBASIC14□□□□□ -0.17
Nup98Q6PFD9 Gm30671-201ENSMUST00000214898 318 ntBASIC14□□□□□ -0.17
Nup98Q6PFD9 CT573047.1-201ENSMUST00000223652 851 ntBASIC14□□□□□ -0.17
Nup98Q6PFD9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14□□□□□ -0.17
Nup98Q6PFD9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nup98Q6PFD9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm15549-201ENSMUST00000121595 622 ntBASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup98Q6PFD9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms