Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm5340-201ENSMUST00000203733 880 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm44158-201ENSMUST00000203881 505 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Mir671-201ENSMUST00000102432 98 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm24934-201ENSMUST00000103764 111 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc85bQ6PDY0 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc85bQ6PDY0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms