Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm6152-201ENSMUST00000151704 340 ntBASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm18624-201ENSMUST00000220966 658 ntBASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rnf220Q6PDX6 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf220Q6PDX6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms