Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcc2Q6PDG5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm15236-201ENSMUST00000117309 379 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm13665-201ENSMUST00000120830 528 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Gzmn-202ENSMUST00000225535 989 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Mir433-201ENSMUST00000093564 124 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarcc2Q6PDG5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcc2Q6PDG5 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarcc2Q6PDG5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.08□□□□□ -0.15
Smarcc2Q6PDG5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm2383-201ENSMUST00000181461 807 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm5706-201ENSMUST00000181525 993 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm9136-201ENSMUST00000193368 454 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm44651-201ENSMUST00000207343 372 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.08□□□□□ -0.16
Smarcc2Q6PDG5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms