Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm15824-201ENSMUST00000119516 955 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm13342-201ENSMUST00000121055 207 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm7809-201ENSMUST00000153199 742 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm25927-201ENSMUST00000175058 117 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm5781-201ENSMUST00000219792 443 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smarcd3Q6P9Z1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm24830-201ENSMUST00000102024 166 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm3890-201ENSMUST00000182416 207 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm26232-201ENSMUST00000083360 166 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Smarcd3Q6P9Z1 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smarcd3Q6P9Z1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms