Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Gm9166-201ENSMUST00000120293 561 ntBASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slx4Q6P1D7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slx4Q6P1D7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slx4Q6P1D7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Slx4Q6P1D7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Gm22594-201ENSMUST00000104251 130 ntBASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Gm4294-201ENSMUST00000105169 614 ntBASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slx4Q6P1D7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm24328-201ENSMUST00000175104 67 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm21778-201ENSMUST00000178779 471 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm4895-201ENSMUST00000181646 1137 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm5982-201ENSMUST00000196234 512 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Mir181d-201ENSMUST00000102383 72 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm43854-201ENSMUST00000200418 394 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm45484-201ENSMUST00000210310 1141 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm5053-201ENSMUST00000208361 1678 ntBASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC18.25■□□□□ 0.51
Slx4Q6P1D7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 CT030135.2-201ENSMUST00000225255 893 ntBASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slx4Q6P1D7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms