Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf8Q6DID3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scaf8Q6DID3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scaf8Q6DID3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Gm12783-201ENSMUST00000121425 397 ntBASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.2□□□□□ -0.14
Scaf8Q6DID3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scaf8Q6DID3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm15784-201ENSMUST00000120260 1462 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm8723-201ENSMUST00000166076 820 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm8701-201ENSMUST00000169259 874 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm8815-201ENSMUST00000173809 620 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm29499-201ENSMUST00000189151 486 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm28329-201ENSMUST00000191208 689 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm29171-201ENSMUST00000191397 486 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm44146-201ENSMUST00000203508 816 ntBASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Scaf8Q6DID3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms