Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cd47Q61735 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm25261-201ENSMUST00000157416 134 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Gm44405-201ENSMUST00000198952 126 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Gm6007-201ENSMUST00000208170 823 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm45930-201ENSMUST00000221330 292 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Snora73a-201ENSMUST00000082453 205 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cd47Q61735 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cd47Q61735 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Cd47Q61735 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.1□□□□□ -0.63
Cd47Q61735 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.1□□□□□ -0.63
Cd47Q61735 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd47Q61735 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cd47Q61735 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd47Q61735 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.09□□□□□ -0.63
Cd47Q61735 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Cd47Q61735 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.09□□□□□ -0.63
Cd47Q61735 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cd47Q61735 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm27731-201ENSMUST00000185192 107 ntBASIC11.09□□□□□ -0.63
Cd47Q61735 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm18304-201ENSMUST00000189162 546 ntBASIC11.09□□□□□ -0.63
Cd47Q61735 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.09□□□□□ -0.63
Cd47Q61735 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cd47Q61735 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cd47Q61735 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cd47Q61735 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Cd47Q61735 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cd47Q61735 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Cd47Q61735 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd47Q61735 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cd47Q61735 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms