Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Gm9797-201ENSMUST00000052902 613 ntBASIC14.54□□□□□ -0.08
Mre11Q61216 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Mre11Q61216 Gm10478-201ENSMUST00000084451 396 ntBASIC14.54□□□□□ -0.08
Mre11Q61216 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.54□□□□□ -0.08
Mre11Q61216 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Mre11Q61216 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Mre11Q61216 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Mre11Q61216 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Mre11Q61216 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Mre11Q61216 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Mre11Q61216 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.53□□□□□ -0.08
Mre11Q61216 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.53□□□□□ -0.08
Mre11Q61216 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Mre11Q61216 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.53□□□□□ -0.08
Mre11Q61216 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Mre11Q61216 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Mre11Q61216 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Mre11Q61216 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.52□□□□□ -0.08
Mre11Q61216 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Mre11Q61216 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Gm37613-201ENSMUST00000195677 3580 ntBASIC14.52□□□□□ -0.08
Mre11Q61216 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Mre11Q61216 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Mre11Q61216 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Mre11Q61216 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Mre11Q61216 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Mre11Q61216 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.52□□□□□ -0.09
Mre11Q61216 Gm22709-201ENSMUST00000116893 111 ntBASIC14.52□□□□□ -0.09
Mre11Q61216 Gm14579-201ENSMUST00000117068 283 ntBASIC14.52□□□□□ -0.09
Mre11Q61216 Gm14057-201ENSMUST00000120631 482 ntBASIC14.52□□□□□ -0.09
Mre11Q61216 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC14.52□□□□□ -0.09
Mre11Q61216 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Mre11Q61216 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.52□□□□□ -0.09
Mre11Q61216 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC14.52□□□□□ -0.09
Mre11Q61216 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Mre11Q61216 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.51□□□□□ -0.09
Mre11Q61216 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.51□□□□□ -0.09
Mre11Q61216 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Mre11Q61216 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Mre11Q61216 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC14.51□□□□□ -0.09
Mre11Q61216 Snord83b-201ENSMUST00000104546 94 ntBASIC14.51□□□□□ -0.09
Mre11Q61216 Gm13333-201ENSMUST00000119424 781 ntBASIC14.51□□□□□ -0.09
Mre11Q61216 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.51□□□□□ -0.09
Mre11Q61216 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Mre11Q61216 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms