Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Traf3Q60803 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Gm27627-201ENSMUST00000183644 150 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.63□□□□□ -0.39
Traf3Q60803 Gm2260-201ENSMUST00000184965 657 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm29615-201ENSMUST00000185371 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28224-201ENSMUST00000186078 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm29001-201ENSMUST00000186177 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28292-201ENSMUST00000186593 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28101-201ENSMUST00000187608 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm29076-201ENSMUST00000187689 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28302-201ENSMUST00000187931 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28646-201ENSMUST00000188220 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28205-201ENSMUST00000189177 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm29032-201ENSMUST00000189797 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28695-201ENSMUST00000190300 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.63□□□□□ -0.39
Traf3Q60803 Gm37448-201ENSMUST00000192795 697 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Gm9136-201ENSMUST00000193368 454 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.63□□□□□ -0.39
Traf3Q60803 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.63□□□□□ -0.39
Traf3Q60803 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Traf3Q60803 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Traf3Q60803 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Traf3Q60803 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.62□□□□□ -0.39
Traf3Q60803 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Gm14017-201ENSMUST00000121934 386 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.62□□□□□ -0.39
Traf3Q60803 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Traf3Q60803 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.62□□□□□ -0.39
Traf3Q60803 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Traf3Q60803 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Traf3Q60803 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.62□□□□□ -0.39
Traf3Q60803 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.61□□□□□ -0.39
Traf3Q60803 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.61□□□□□ -0.39
Traf3Q60803 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Traf3Q60803 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm26286-201ENSMUST00000104166 134 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.61□□□□□ -0.39
Traf3Q60803 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm15236-201ENSMUST00000117309 379 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Gm11511-201ENSMUST00000118146 540 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Gm12380-201ENSMUST00000119012 544 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.61□□□□□ -0.39
Traf3Q60803 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm8956-201ENSMUST00000203939 825 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Gm17827-201ENSMUST00000211825 742 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Traf3Q60803 Gm8385-201ENSMUST00000058999 643 ntBASIC12.61□□□□□ -0.39
Traf3Q60803 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms