Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm9062-201ENSMUST00000117712 727 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm13461-201ENSMUST00000120980 662 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm38117-201ENSMUST00000194653 939 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm43378-201ENSMUST00000199336 582 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Gm45575-201ENSMUST00000210283 548 ntBASIC14.47□□□□□ -0.09
NfkbibQ60778 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.47□□□□□ -0.09
NfkbibQ60778 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NfkbibQ60778 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm11331-201ENSMUST00000119764 288 ntBASIC14.46□□□□□ -0.09
NfkbibQ60778 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm20426-201ENSMUST00000173657 440 ntBASIC14.46□□□□□ -0.09
NfkbibQ60778 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm6867-201ENSMUST00000219165 425 ntBASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NfkbibQ60778 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NfkbibQ60778 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfkbibQ60778 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfkbibQ60778 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.46□□□□□ -0.1
NfkbibQ60778 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NfkbibQ60778 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfkbibQ60778 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NfkbibQ60778 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.46□□□□□ -0.1
NfkbibQ60778 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NfkbibQ60778 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.45□□□□□ -0.1
NfkbibQ60778 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm12165-201ENSMUST00000117047 342 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm15207-201ENSMUST00000119259 442 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.45□□□□□ -0.1
NfkbibQ60778 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm8815-201ENSMUST00000173809 620 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm19353-201ENSMUST00000184561 445 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm37246-201ENSMUST00000192665 835 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm5714-201ENSMUST00000197343 566 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm6450-201ENSMUST00000200896 574 ntBASIC14.45□□□□□ -0.1
NfkbibQ60778 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms