Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm5706-201ENSMUST00000181525 993 ntBASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm43630-201ENSMUST00000201550 776 ntBASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rnf20Q5DTM8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm15610-201ENSMUST00000120584 195 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm27046-201ENSMUST00000182160 463 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Cts7-204ENSMUST00000225321 1257 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rnf20Q5DTM8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm11989-201ENSMUST00000117240 672 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm11362-201ENSMUST00000118838 850 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm45865-201ENSMUST00000211815 945 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 CT009738.1-201ENSMUST00000219031 809 ntBASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms