Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm25804-201ENSMUST00000122785 188 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm8707-201ENSMUST00000183325 980 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm8155-201ENSMUST00000216363 1612 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm12047-201ENSMUST00000117561 944 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Gm4866-201ENSMUST00000197408 589 ntBASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Herc2Q4U2R1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 n-R5s154-201ENSMUST00000122513 108 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm28746-201ENSMUST00000187453 380 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 AC154669.1-201ENSMUST00000224405 482 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm27196-201ENSMUST00000184787 2582 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm5873-201ENSMUST00000177157 1066 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm37723-201ENSMUST00000194480 565 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm44460-201ENSMUST00000196179 129 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm42732-201ENSMUST00000202887 1197 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm8174-201ENSMUST00000064353 1001 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm9415-201ENSMUST00000200462 1321 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm12424-201ENSMUST00000179673 447 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Mir8091-201ENSMUST00000183602 139 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 CT009713.2-201ENSMUST00000225532 1149 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm7589-201ENSMUST00000085631 534 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm10689-201ENSMUST00000098864 432 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm43858-201ENSMUST00000199418 1778 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Il17rd-203ENSMUST00000225146 3366 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Gm42651-201ENSMUST00000199851 1339 ntBASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Herc2Q4U2R1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms