Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm13461-201ENSMUST00000120980 662 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm15432-201ENSMUST00000121106 195 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38aQ4FK66 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Cog3-203ENSMUST00000227473 4197 ntBASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Mir1943-201ENSMUST00000158276 73 ntBASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Mir3547-201ENSMUST00000175461 88 ntBASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38aQ4FK66 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf38aQ4FK66 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf38aQ4FK66 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf38aQ4FK66 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Gm13809-201ENSMUST00000117921 597 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Gm9550-201ENSMUST00000161130 862 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Gm17931-201ENSMUST00000208132 634 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Ginm1-202ENSMUST00000065124 300 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.08□□□□□ -0.16
Prpf38aQ4FK66 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms