Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm24934-201ENSMUST00000103764 111 ntBASIC14.24□□□□□ -0.13
Limch1Q3UH68 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Gm14208-201ENSMUST00000119645 678 ntBASIC14.24□□□□□ -0.13
Limch1Q3UH68 Gm12566-201ENSMUST00000121479 359 ntBASIC14.24□□□□□ -0.13
Limch1Q3UH68 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.24□□□□□ -0.13
Limch1Q3UH68 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Mir6927-201ENSMUST00000184494 71 ntBASIC14.24□□□□□ -0.13
Limch1Q3UH68 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Limch1Q3UH68 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.23□□□□□ -0.13
Limch1Q3UH68 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm28882-201ENSMUST00000185504 314 ntBASIC14.23□□□□□ -0.13
Limch1Q3UH68 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.23□□□□□ -0.13
Limch1Q3UH68 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Limch1Q3UH68 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Gm23912-201ENSMUST00000104687 87 ntBASIC14.22□□□□□ -0.13
Limch1Q3UH68 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Gm44262-201ENSMUST00000204969 372 ntBASIC14.22□□□□□ -0.13
Limch1Q3UH68 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.22□□□□□ -0.13
Limch1Q3UH68 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.22□□□□□ -0.13
Limch1Q3UH68 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.22□□□□□ -0.13
Limch1Q3UH68 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Limch1Q3UH68 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Limch1Q3UH68 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Limch1Q3UH68 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.21□□□□□ -0.13
Limch1Q3UH68 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms