Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gm11439-201ENSMUST00000118598 409 ntBASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm12036-201ENSMUST00000120008 530 ntBASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm28071-201ENSMUST00000190355 478 ntBASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.38□□□□□ -0.59
Mmp25Q3U435 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Mmp25Q3U435 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Pck2-205ENSMUST00000226352 2784 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm26286-201ENSMUST00000104166 134 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm12997-201ENSMUST00000120207 640 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm14277-201ENSMUST00000121195 360 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm18893-201ENSMUST00000198416 943 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm17931-201ENSMUST00000208132 634 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm18730-201ENSMUST00000218038 343 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.37□□□□□ -0.59
Mmp25Q3U435 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Mmp25Q3U435 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Mmp25Q3U435 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Mmp25Q3U435 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms