Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdkl4Q3TZA2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm7857-201ENSMUST00000117957 358 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm14208-201ENSMUST00000119645 678 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Mir3102-201ENSMUST00000175555 104 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Mir7070-201ENSMUST00000183657 86 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm43138-201ENSMUST00000199123 708 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdkl4Q3TZA2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm12036-201ENSMUST00000120008 530 ntBASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdkl4Q3TZA2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdkl4Q3TZA2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms