Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdlim7Q3TJD7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm7541-201ENSMUST00000118361 535 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm12030-201ENSMUST00000121917 223 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm3150-201ENSMUST00000166418 204 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm44882-201ENSMUST00000205702 802 ntBASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pdlim7Q3TJD7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm5257-201ENSMUST00000121823 790 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm38117-201ENSMUST00000194653 939 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm42779-201ENSMUST00000198807 406 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm4604-201ENSMUST00000025040 390 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm5805-201ENSMUST00000072779 456 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pdlim7Q3TJD7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim7Q3TJD7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim7Q3TJD7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim7Q3TJD7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim7Q3TJD7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim7Q3TJD7 Gm25766-201ENSMUST00000104101 131 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms