Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm13422-201ENSMUST00000118834 504 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm27440-201ENSMUST00000184785 107 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm18504-201ENSMUST00000220917 929 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 AC161374.2-201ENSMUST00000223662 596 ntBASIC10.76□□□□□ -0.69
Chd8Q09XV5 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Chd8Q09XV5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm5419-201ENSMUST00000119301 527 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm24466-201ENSMUST00000179978 109 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm7242-201ENSMUST00000221134 705 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm5191-201ENSMUST00000222882 1236 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm17782-201ENSMUST00000174345 880 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm8197-202ENSMUST00000193422 934 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm42689-201ENSMUST00000202403 404 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gm44908-201ENSMUST00000208610 266 ntBASIC10.75□□□□□ -0.69
Chd8Q09XV5 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Chd8Q09XV5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm11295-201ENSMUST00000121379 803 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm11993-201ENSMUST00000121861 820 ntBASIC10.74□□□□□ -0.69
Chd8Q09XV5 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms