Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm22661-201ENSMUST00000104192 132 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm11989-201ENSMUST00000117240 672 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm11362-201ENSMUST00000118838 850 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm15566-201ENSMUST00000121130 590 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm37458-201ENSMUST00000194055 410 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Gm21461-201ENSMUST00000200382 863 ntBASIC12.17□□□□□ -0.46
Col9a1Q05722 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Col9a1Q05722 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col9a1Q05722 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col9a1Q05722 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 AC131068.3-201ENSMUST00000228438 1456 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm13732-201ENSMUST00000117753 535 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm13281-201ENSMUST00000120871 567 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm9517-201ENSMUST00000195021 874 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Col9a1Q05722 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm9204-201ENSMUST00000212641 947 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 AC154843.1-201ENSMUST00000226897 1138 ntBASIC12.16□□□□□ -0.46
Col9a1Q05722 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col9a1Q05722 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col9a1Q05722 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a1Q05722 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a1Q05722 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a1Q05722 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a1Q05722 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.15□□□□□ -0.46
Col9a1Q05722 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a1Q05722 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms