Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Col8a1Q00780 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Col8a1Q00780 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Col8a1Q00780 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Col8a1Q00780 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Col8a1Q00780 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Col8a1Q00780 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm11509-201ENSMUST00000117358 325 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm11949-201ENSMUST00000117640 372 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm16071-201ENSMUST00000119589 793 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Col8a1Q00780 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Mir7221-201ENSMUST00000184009 72 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm17826-201ENSMUST00000189720 798 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm5298-201ENSMUST00000201122 892 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm44980-201ENSMUST00000205826 314 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a1Q00780 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.34□□□□□ -0.75
Col8a1Q00780 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.33□□□□□ -0.76
Col8a1Q00780 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm12857-201ENSMUST00000117678 592 ntBASIC10.33□□□□□ -0.76
Col8a1Q00780 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Mir8115-201ENSMUST00000184992 119 ntBASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm35713-201ENSMUST00000210516 199 ntBASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms